FFCP PHASE2:Hg19::chr20:60942361..60942376,-
From FANTOM5_SSTAR
Jump to: navigation, search
Short description: | p1@LAMA5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LAMA5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000252999, NM_005560, uc002ycq.2_5end |
EntrezGene: | LAMA5 |
HGNC: | 6485 |
UniProt: | O15230 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@LAMA5 |
---|
0
100
200
300
400
500
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.48e-50 | 253 |
endodermal cell | 1.07e-18 | 58 |
embryonic cell | 5.52e-18 | 250 |
endo-epithelial cell | 1.05e-15 | 42 |
squamous epithelial cell | 3.43e-13 | 63 |
epithelial cell of alimentary canal | 5.66e-09 | 20 |
epithelial cell of nephron | 2.99e-08 | 15 |
kidney cell | 3.83e-08 | 17 |
kidney epithelial cell | 3.83e-08 | 17 |
lining cell | 5.47e-07 | 58 |
Showing 1 to 10 of 13 entries
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 4.71e-23 | 160 |
endoderm | 4.71e-23 | 160 |
presumptive endoderm | 4.71e-23 | 160 |
trunk region element | 7.72e-22 | 101 |
digestive system | 4.99e-20 | 145 |
digestive tract | 4.99e-20 | 145 |
primitive gut | 4.99e-20 | 145 |
anatomical conduit | 4.53e-19 | 240 |
cell layer | 8.67e-18 | 309 |
epithelium | 1.22e-17 | 306 |
Showing 1 to 10 of 60 entries
Ontology term | p-value | n |
---|---|---|
carcinoma | 9.08e-24 | 106 |
cell type cancer | 3.02e-20 | 143 |
adenocarcinoma | 5.10e-08 | 25 |
squamous cell carcinoma | 2.21e-07 | 14 |
cancer | 5.37e-07 | 235 |
Showing 1 to 5 of 5 entries